DeepNovo V2
algorithm · CNN + RNN
DeepNovo V2: algorithm · CNN + RNN. Improved CNN+LSTM model
Improved CNN+LSTM model
| Kind | algorithm |
| Deep learning | yes |
| Acquisition | DDA |
| Family | CNN + RNN |
Code
Live stars, open issues and last-push figures are on the Code activity chart.
Data
What the papers describing this method trained it on and reported its results on, as each paper states it. A version is named only where the paper names one.
Trained on
- ABRF PRG 2018 HeLa DDA (PRG 2018 runs)
- Nine-species benchmark (original (DeepNovo, 2017))
Evaluated on
- ABRF PRG 2018 HeLa DDA (PRG 2018 runs)
- Nine-species benchmark (original (DeepNovo, 2017))
Paper describing it
- DeepNovoV2: Better de novo peptide sequencing with deep learning (2019, arXiv, preprint)