Denovo-GCN

algorithm · GNN

Denovo-GCN: algorithm · GNN. GCN on spectrum graph

GCN on spectrum graph

Kind	algorithm
Deep learning	yes
Acquisition	DDA
Family	GNN

Benchmarks

• denovo_benchmarks: median peptide-level average precision 0.559 over 86 datasets, median rank 11 of 14 (version bm-1.0.0).

Both are mass-based matches on the tool’s most recent run. What these numbers mean.

Paper describing it

• Denovo-GCN: De Novo Peptide Sequencing by Graph Convolutional Neural Networks (2023, Applied Sciences (MDPI), peer-reviewed)

Authors (4)

Ruitao Wu, Xiang Zhang (Shandong), Runtao Wang, Haipeng Wang

Seen in the charts

• The architectures
• Models and the authors behind them

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