Modanovo

algorithm · Transformer (AR)

Modanovo: algorithm · Transformer (AR). Unified PTM-aware model

Unified PTM-aware model

Kind	algorithm
Family	Transformer (AR)
Deep learning	yes
Acquisition	DDA

Code

• https://github.com/gagneurlab/Modanovo

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Papers

• Modanovo: A Unified Model for Post-translational Modification-Aware De Novo Sequencing Using Experimental Spectra From In Vivo and Synthetic Peptides (2025, Molecular & Cellular Proteomics, peer-reviewed)
• Modanovo: A Unified Model for Post-Translational Modification-Aware de Novo Sequencing Using Experimental Spectra from In Vivo and Synthetic Peptides (2025, bioRxiv, preprint)

Authors (8)

Daniela Klaproth-Andrade, Yanik Bruns, Wassim Gabriel, Christian Nix, Valter Bergant, Andreas Pichlmair, Mathias Wilhelm, Julien Gagneur

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