NovoB

algorithm · Transformer (AR)

NovoB: algorithm · Transformer (AR). Bidirectional decoding

Bidirectional decoding

Kind	algorithm
Deep learning	yes
Acquisition	DDA
Family	Transformer (AR)

Code

• https://github.com/ProteomeTeam/NovoB

Live stars, open issues and last-push figures are on the Code activity chart.

Paper describing it

• Bidirectional de novo peptide sequencing using a transformer model (2024, PLOS Computational Biology, peer-reviewed)

Authors (2)

Sangjeong Lee, Hyunwoo Kim

Seen in the charts

• The architectures
• Code activity

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