OpenSea

adjacent · Alignment

OpenSea: adjacent · Alignment. Alignment algorithm using MS/MS de novo sequencing to identify protein modifications.

Alignment algorithm using MS/MS de novo sequencing to identify protein modifications.

Kind	adjacent
Deep learning	no
Acquisition	DDA
Family	Alignment

Papers describing it (2)

• High-Throughput Identification of Proteins and Unanticipated Sequence Modifications Using a Mass-Based Alignment Algorithm for MS/MS de Novo Sequencing Results (2004, Analytical Chemistry, peer-reviewed)
• Identification of Protein Modifications Using MS/MS de Novo Sequencing and the OpenSea Alignment Algorithm (2005, Journal of Proteome Research, peer-reviewed)

Authors (9)

Brian C. Searle, Surendra Dasari, Mark S. Turner, Ashok P. Reddy, Dongseok Choi, Phillip A. Wilmarth, Ashley L. McCormack, Larry L. David, Srinivasa R. Nagalla

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