pUniFind

algorithm · Transformer (AR)

pUniFind: algorithm · Transformer (AR). Multimodal pre-trained transformer for mass spectra that unifies peptide-spectrum scoring and zero-shot de novo sequencing in a single model. Trained on >100M…

Multimodal pre-trained transformer for mass spectra that unifies peptide-spectrum scoring and zero-shot de novo sequencing in a single model. Trained on >100M open-search-derived spectra; reports +60% PSMs over prior de novo methods with 1,300+ modifications supported, and a DL-based QC step that recovers 38.5% additional peptides.

Kind algorithm
Deep learning yes
Acquisition DDA
Family Transformer (AR)

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What the papers describing this method trained it on and reported its results on, as each paper states it. A version is named only where the paper names one.

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Papers describing it (2)

Authors (15)

Jiale Zhao, Pengzhi Mao, Kaifei Wang, Yiming Li, Yaping Peng, Ranfei Chen, Shuqi Lu, Xiaohong Ji, Jiaxiang Ding, Xin Zhang, Yucheng Liao, Weinan E, Weijie Zhang, Han Wen, Hao Chi

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