University of Cape Town
Cape Town, South Africa · 28 authors
University of Cape Town (Cape Town, South Africa): 28 authors and 17 papers in the de novo peptide sequencing catalog.
Departments
- Department of Archaeology
- Department of Biological Sciences
Papers (17)
- Enamel proteins reveal biological sex and genetic variability in southern African Paranthropus (2025, Science)
- Benchmarking the identification of a single degraded protein to explore optimal search strategies for ancient proteins (2024, Peer Community Journal)
- Benchmarking the identification of a single degraded protein to explore optimal search strategies for ancient proteins (2023, bioRxiv)
- MetaNovo: An open-source pipeline for probabilistic peptide discovery in complex metaproteomic datasets (2023, PLOS Computational Biology)
- Mass Spectrometric Proof of Predicted Peptides: Novel Adipokinetic Hormones in Insects (2022, Molecules)
- ProAlanase is an Effective Alternative to Trypsin for Proteomics Applications and Disulfide Bond Mapping (2020, Molecular & Cellular Proteomics)
- The dental proteome of Homo antecessor (2020, Nature)
- Enamel proteome shows that Gigantopithecus was an early diverging pongine (2019, Nature)
- Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny (2019, Nature)
- ’Palaeoshellomics’ reveals the use of freshwater mother-of-pearl in prehistory (2019, eLife)
- MetaNovo: a probabilistic approach to peptide discovery in complex metaproteomic datasets (2019, bioRxiv)
- Protein sequences bound to mineral surfaces persist into deep time (2016, eLife)
- ScanRanker: Quality Assessment of Tandem Mass Spectra via Sequence Tagging (2011, Journal of Proteome Research)
- DirecTag: Accurate Sequence Tags from Peptide MS/MS through Statistical Scoring (2008, Journal of Proteome Research)
- Multi-spectra peptide sequencing and its applications to multistage mass spectrometry (2008, Bioinformatics)
- De novo sequencing of antimicrobial peptides isolated from the venom glands of the wolf spider Lycosa singoriensis (2004, Journal of Mass Spectrometry)
- GutenTag: High-Throughput Sequence Tagging via an Empirically Derived Fragmentation Model (2003, Analytical Chemistry)