University of Pennsylvania
Philadelphia, USA · 7 authors
University of Pennsylvania (Philadelphia, USA): 7 authors and 10 papers in the de novo peptide sequencing catalog.
Departments
- Department of Pathology and Laboratory Medicine, Perelman School of Medicine
Papers (10)
- De Novo Sequencing of Peptides from Tandem Mass Spectra and Applications in Proteogenomics (2024, Methods in Molecular Biology)
- MARS an improved de novo peptide candidate selection method for non-canonical antigen target discovery in cancer (2024, Nature Communications)
- MARS: Improved De Novo Peptide Candidate Selection for Non-Canonical Antigen Target Discovery in Cancer (2022, Research Square)
- Mass spectrometry profiling and quantitation of changes in circulating hormones secreted over time in Cancer borealis hemolymph due to feeding behavior (2022, Analytical and Bioanalytical Chemistry)
- Mass Spectrometry Quantification, Localization, and Discovery of Feeding-Related Neuropeptides in Cancer borealis (2021, ACS Chemical Neuroscience)
- DNMSO; an ontology for representing de novo sequencing results from Tandem-MS data (2020, PeerJ)
- De novo markup language, a standard to represent de novo sequencing results from MS/MS data (2012, 2012 7th International Symposium on Health Informatics and Bioinformatics)
- Algorithms for the de novo sequencing of peptides from tandem mass spectra (2011, Expert Review of Proteomics)
- Concerted action of the new Genomic Peptide Finder and AUGUSTUS allows for automated proteogenomic annotation of the Chlamydomonas reinhardtii genome (2011, PROTEOMICS)
- Mass spectrometric genomic data mining: Novel insights into bioenergetic pathways in Chlamydomonas reinhardtii (2006, PROTEOMICS)