A de novo peptide sequencing method, device and related equipment
CN116248680B · Hunan University of Technology and Business · priority 2023
| Patent | CN116248680B ↗ |
| Status | Active |
| Priority date | 2023-05-11 |
| Filed | 2023-05-11 |
| Published (granted) | 2023-08-01 |
| Assignee | Hunan University of Technology and Business (printed Hunan University of Technology) |
| Also published as | CN116248680A |
Abstract
Translated from Chinese 本发明公开了一种基于边缘计算的从头肽段测序方法、装置、计算机设备及存储介质，该方法包括：边缘设备向中心发送第一数据请求消息和第二数据请求消息，第一数据请求消息用于请求质谱数据，第二数据请求消息用于请求候选肽段；边缘设备接收所述中心设备发送的质谱数据并进行预处理，将得到的结果数据返回给中心设备；边缘设备接收中心设备根据结果数据生成的候选肽段，并基于打分算法对候选肽段进行打分计算，得到打分结果；边缘设备将打分结果返回给中心设备，以使中心设备根据打分结果输出符合要求的肽段。采用本发明可以减少中心设备的数据处理压力和测序成本，提高质谱数据的处理效率。 The invention discloses a de novo peptide sequencing method, device, computer equipment and storage medium based on edge computing. The method includes: the edge device sends a first data request message and a second data request message to the center, and the first data request message It is used to request mass spectrometry data, and the second data request message is used to request candidate peptides; the edge device receives the mass spectrometry data sent by the central device and performs preprocessing, and returns the obtained result data to the central device; the edge device receives the central device according to The candidate peptides generated by the result data are scored and calculated based on the scoring algorithm to obtain the scoring results; the edge device returns the scoring results to the central device, so that the central device can output peptides that meet the requirements according to the scoring results. By adopting the invention, the data processing pressure and sequencing cost of the central equipment can be reduced, and the processing efficiency of mass spectrum data can be improved.
Why it is here
Hunan University of Technology and Business: de novo peptide sequencing split between edge and central devices.
Inventors (6)
文艳华, 张子怡, 李闯, 何成文, 南苏琴, 魏建好
An inventor links to an author page only where the same person is evident, never on a name alone.
Catalogued patents it cites (1)
- CN103852513B A kind of peptide section de novo sequencing method and system based on HCD and ETD mass spectrogram
Cited by (1 patent families, 1 organisations)
- 湖南师范大学 academic: CN118962157B
Every family, of any applicant, that cites this one, as Google Patents lists them; an assignee is given its English name.