Constrained de novo sequencing of peptides
US20130144540A1 · Palo Alto Research Center · priority 2011
| Patent | US20130144540A1 ↗ |
| Status | Abandoned |
| Priority date | 2011-12-06 |
| Filed | 2011-12-06 |
| Published | 2013-06-06 |
| Assignee | Palo Alto Research Center (printed Palo Alto Research Center Inc) |
Abstract
A peptide sequencing system derives a peptide sequence from a mass spectrum. The system can receive a description for a peptide sequence constraint, such that the constraint indicates a symbol pattern that is to be present in a peptide sequence derived from the mass spectrum. Then, the system generates a peptide sequence based on the mass spectrum and the constraint, such that the peptide sequence matches the constraint and has a mass that matches the total mass of the peptide as determined from the mass spectrum.
Why it is here
Palo Alto Research Center: de novo sequencing constrained by a user-given sequence pattern. Abandoned application.
Inventors (2)
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Cited by (12 patent families, 1 organisations)
- Protein Metrics company: US9640376B1, US9385751B2, US10354421B2, US10319573B2, US10546736B2, US11626274B2, US12400846B2, US10510521B2, US12224169B2, US11640901B2, US11346844B2, US11276204B1
Every family, of any applicant, that cites this one, as Google Patents lists them; an assignee is given its English name.