Jeroen Van Goey
Just Another Genome Hacker
About Me
Projects
InstaNovo
De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments
Snakes and Sequences: Senegalese Serpent Venom Sequencing Hackathon
This hackathon focused on improving the predictions of the de novo peptide sequencing model IsntaNovo using filtering and recalibration on a dataset of Snakes present in Africa.
Desert locust breeding ground prediction hackathon
A machine learning hackathon to predict desert locust breeding grounds using remote sensing data and to improve model performance on the Zindi leaderboard.
euler
My solutions to Project Euler.
adventofcode
My solutions to Advent of Code.
Experience
InstaDeep
Staff Software Engineer in BioAI - Machine Learning for personalized cancer vaccines,
August 2022 - Present
Barco
Sr. Software Development Engineer - Machine Learning for dermatology,
February 2020 - August 2022
BASF
Bioinformatics Researcher - Manager of the Python and R Platforms,
August 2018 - January 2020
Skills
Languages & Frameworks
- Python: pandas, NumPy, Tensorflow, BioPython, Jax, …
Bioinformatics
- BLAST, ClustalW, Snakemake, BioNumerics, …
Other
- Docker, Amazon Web Services (AWS), CI/CD, …