Banana plasma membrane proteome workflow
downstream-application
Banana plasma membrane proteome workflow: downstream-application. A shotgun membrane proteomics workflow for the poorly sequenced banana, using de novo sequencing for sequence homology search and Cytoscape to remove redundant or wrong…
A shotgun membrane proteomics workflow for the poorly sequenced banana, using de novo sequencing for sequence homology search and Cytoscape to remove redundant or wrong assignments.
| Kind | downstream-application |
| Deep learning | no |
| Acquisition | DDA |
| Application area | General proteomics |
Paper describing it
- A workflow for peptide-based proteomics in a poorly sequenced plant: A case study on the plasma membrane proteome of banana (2011, Journal of Proteomics, peer-reviewed)