Casanovo-DM2
algorithm · Diffusion
Casanovo-DM2: algorithm · Diffusion. Diffusion decoder variants (Casanovo-DS / DM1 / DM2) plugged into Casanovo’s spectrum encoder; DM2 + DINOISER loss reported the best amino-acid recall.
Diffusion decoder variants (Casanovo-DS / DM1 / DM2) plugged into Casanovo’s spectrum encoder; DM2 + DINOISER loss reported the best amino-acid recall.
| Kind | algorithm |
| Deep learning | yes |
| Acquisition | DDA |
| Family | Diffusion |
Data
What the papers describing this method trained it on and reported its results on, as each paper states it. A version is named only where the paper names one.
Trained on
- Casanovo digestion enzyme bias data (as deposited)
Evaluated on
- Casanovo digestion enzyme bias data (as deposited)
Paper describing it
- Diffusion Decoding for Peptide De Novo Sequencing (2025, arXiv, preprint)