Constrained neo-epitope de novo sequencing
algorithm · Constrained search
Constrained neo-epitope de novo sequencing: algorithm · Constrained search. Constrained de novo sequencing of MHC-I neoepitope peptides, which differ from a reference peptide by a mutation, from immunopeptidomic MS/MS.
Constrained de novo sequencing of MHC-I neoepitope peptides, which differ from a reference peptide by a mutation, from immunopeptidomic MS/MS.
| Kind | algorithm |
| Deep learning | no |
| Acquisition | DDA |
| Family | Constrained search |
Patents (1)
- US20210020270A1 Constrained de novo sequencing of neo-epitope peptides using tandem mass spectrometry ↗ (Indiana University Bloomington, priority 2018-03-08, abandoned)
Patent families that claim this method, matched by hand. A patent’s status is Google Patents’ reading of its legal events.
Paper describing it
- Constrained De Novo Sequencing of neo-Epitope Peptides Using Tandem Mass Spectrometry (2018, Lecture Notes in Computer Science, peer-reviewed)