Daboia siamensis multi-omics venomics

downstream-application

Daboia siamensis multi-omics venomics: downstream-application. Multi-omics venomics of Russell’s viper (Daboia siamensis, Thai specimens): 10x-linked-read + short-read genome assembly and venom-gland transcriptomics feed a…

Multi-omics venomics of Russell’s viper (Daboia siamensis, Thai specimens): 10x-linked-read + short-read genome assembly and venom-gland transcriptomics feed a MAKER-annotated CDS database, which is searched with PEAKS Studio (database) plus SMSNet (deep-learning de novo) to identify 1,662 venom proteins including previously unreported hyaluronidase-1, phospholipase B and waprin.

Kind downstream-application
Acquisition DDA
Application area venomics

Papers

Authors (12)

Thammakorn Saethang, Poorichaya Somparn, Sunchai Payungporn, Sira Sriswasdi, Khin Than Yee, Kenneth Hodge, Mark A. Knepper, Lawan Chanhome, Orawan Khow, Narongsak Chaiyabutr, Visith Sitprija, Trairak Pisitkun

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