Eucalyptus grandis novel protein-coding sequences
downstream-application
Eucalyptus grandis novel protein-coding sequences: downstream-application. Proteogenomic search for unannotated proteins in Eucalyptus grandis using a dedicated de novo peptide sequencing pipeline (PEAKS plus PatternLab), confirming 41 novel…
Proteogenomic search for unannotated proteins in Eucalyptus grandis using a dedicated de novo peptide sequencing pipeline (PEAKS plus PatternLab), confirming 41 novel peptide forms, mostly from alternative reading frames, by PRM.
| Kind | downstream-application |
| Deep learning | no |
| Acquisition | DDA |
| Application area | General proteomics |
Paper describing it
- Identification of novel protein-coding sequences in Eucalyptus grandis plants by high-resolution mass spectrometry (2021, Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics, peer-reviewed)