Genomic Peptide Finder

adjacent · Homology search

Genomic Peptide Finder: adjacent · Homology search. Aligns de novo sequenced peptides directly to a genome, tolerating sequencing errors and introns, to provide proteogenomic evidence for gene annotation.

Aligns de novo sequenced peptides directly to a genome, tolerating sequencing errors and introns, to provide proteogenomic evidence for gene annotation.

Kind	adjacent
Deep learning	no
Acquisition	DDA
Family	Homology search

Paper describing it

• Concerted action of the new Genomic Peptide Finder and AUGUSTUS allows for automated proteogenomic annotation of the Chlamydomonas reinhardtii genome (2011, PROTEOMICS, peer-reviewed)

Authors (9)

Michael Specht, Mario Stanke, Mia Terashima, Bianca Naumann‐Busch, Ingrid Janßen, Ricarda Höhner, Erik F. Y. Hom, Chun Liang, Michael Hippler

Seen in the charts

• The architectures

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