GenomicPeptideFinder de novo genomic mining

adjacent · Hybrid de novo + database search

GenomicPeptideFinder de novo genomic mining: adjacent · Hybrid de novo + database search. Pairs de novo amino acid sequencing with the error-tolerant GenomicPeptideFinder search of genomic DNA to find intron-split and alternatively spliced peptides…

Pairs de novo amino acid sequencing with the error-tolerant GenomicPeptideFinder search of genomic DNA to find intron-split and alternatively spliced peptides, applied to Chlamydomonas thylakoids.

Kind	adjacent
Deep learning	no
Acquisition	DDA
Family	Hybrid de novo + database search

Paper describing it

• Mass spectrometric genomic data mining: Novel insights into bioenergetic pathways in Chlamydomonas reinhardtii (2006, PROTEOMICS, peer-reviewed)

Authors (5)

Jens Allmer, Bianca Naumann, Christine Markert, Monica Zhang, Michael Hippler

Seen in the charts

• The architectures
• Models and the authors behind them

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