GP-based scoring function for de novo PSM re-ranking

post-processor · Learning-to-rank

GP-based scoring function for de novo PSM re-ranking: post-processor · Learning-to-rank. Genetic-programming-derived scoring function for re-ranking peptide-spectrum matches emitted by de novo sequencing tools. Improves top-k accuracy over the…

Genetic-programming-derived scoring function for re-ranking peptide-spectrum matches emitted by de novo sequencing tools. Improves top-k accuracy over the default scorer.

Kind	post-processor
Family	Learning-to-rank
Deep learning	no
Acquisition	DDA

Papers

• Improving the Results of De novo Peptide Identification via Tandem Mass Spectrometry Using a Genetic Programming-based Scoring Function for Re-ranking Peptide-Spectrum Matches (2019, arXiv, preprint)

Authors (4)

Samaneh Azari, Bing Xue, Mengjie Zhang, Lifeng Peng

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