HyPep

adjacent · Homology search

HyPep: adjacent · Homology search. Open-source tool that aligns PEAKS de novo sequences against neuropeptide databases with sequence-homology scoring to identify known and discover new neuropeptides.

Open-source tool that aligns PEAKS de novo sequences against neuropeptide databases with sequence-homology scoring to identify known and discover new neuropeptides.

Kind	adjacent
Deep learning	no
Acquisition	DDA
Family	Homology search

Code

• https://github.com/lingjunli-research/HyPep-v1.0

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Data

What the papers describing this method trained it on and reported its results on, as each paper states it. A version is named only where the paper names one.

Deposited

• HyPep: An Open-Source Software for Identification and Discovery of Neuropeptides using Sequence Homology Searching (as deposited)

Paper describing it

• HyPep: An Open-Source Software for Identification and Discovery of Neuropeptides Using Sequence Homology Search (2023, Journal of Proteome Research, peer-reviewed)

Authors (5)

Nhu Q. Vu, Hsu-Ching Yen, Lauren Fields, Weifeng Cao, Lingjun Li

Seen in the charts

• The architectures
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