NovoBoard
benchmark
NovoBoard: benchmark. Decoy-based FDR + accuracy framework
Decoy-based FDR + accuracy framework
| Kind | benchmark |
| Deep learning | no |
| Acquisition | DDA |
Code
Live stars, open issues and last-push figures are on the Code activity chart.
Data
What the papers describing this method trained it on and reported its results on, as each paper states it. A version is named only where the paper names one.
Deposited
Also used, purpose not recorded
- A deep proteome and transcriptome abundance atlas of 29 healthy human tissues (as deposited) · 2024 peer-reviewed, 2024 preprint
- ProteomeTools (Parts I-III) · 2024 peer-reviewed, 2024 preprint
- Surpassing 10,000 identified and quantified proteins in a single run by optimizing current LC-MS instrumentation and dat (as deposited) · 2024 peer-reviewed, 2024 preprint
Papers describing it (2)
- NovoBoard: a comprehensive framework for evaluating the false discovery rate and accuracy of de novo peptide sequencing (2024, bioRxiv, preprint)
- NovoBoard: A Comprehensive Framework for Evaluating the False Discovery Rate and Accuracy of De Novo Peptide Sequencing (2024, Molecular & Cellular Proteomics, peer-reviewed)