NovoCRF

algorithm · Graph / DP

NovoCRF: algorithm · Graph / DP. A conditional random field whose states are prefix masses, so every path is a peptide within 0.06 Da of the precursor; a 310k-parameter scorer of physics-derived…

A conditional random field whose states are prefix masses, so every path is a peptide within 0.06 Da of the precursor; a 310k-parameter scorer of physics-derived ion-match features is trained with exact global normalization over all mass-feasible peptides, decoded by exact k-best search and reranked by two BiGRUs.

Kind algorithm
Deep learning yes
Acquisition DDA
Family Graph / DP

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What the papers describing this method trained it on and reported its results on, as each paper states it. A version is named only where the paper names one.

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Paper describing it

Authors (3)

Rui Qiao, Lei Xin, Baozhen Shan

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