PepExplorer
post-processor · Homology search
PepExplorer: post-processor · Homology search. Aligns de novo peptide sequences from several tools against a target-decoy database and uses a neural network to report homologous proteins at a controlled FDR.
Aligns de novo peptide sequences from several tools against a target-decoy database and uses a neural network to report homologous proteins at a controlled FDR.
| Kind | post-processor |
| Deep learning | no |
| Acquisition | DDA |
| Family | Homology search |
Papers describing it (2)
- PepExplorer: A Similarity-driven Tool for Analyzing de Novo Sequencing Results (2014, Molecular & Cellular Proteomics, peer-reviewed)
- Using PepExplorer to Filter and Organize De Novo Peptide Sequencing Results (2015, Current Protocols in Bioinformatics, peer-reviewed)