PGPointNovo

algorithm · CNN + RNN

PGPointNovo: algorithm · CNN + RNN. Parallel GPU-based PointNovo

Parallel GPU-based PointNovo

Kind	algorithm
Deep learning	yes
Acquisition	DDA
Family	CNN + RNN

Code

• https://github.com/shallFun4Learning/PGPointNovo

Live stars, open issues and last-push figures are on the Code activity chart.

Data

What the papers describing this method trained it on and reported its results on, as each paper states it. A version is named only where the paper names one.

Evaluated on

• Proteome of the rodent malaria parasite Plasmodium berghei liver stage merosomes (as deposited)

Paper describing it

• PGPointNovo: an efficient neural network-based tool for parallel de novo peptide sequencing (2023, Bioinformatics Advances, peer-reviewed)

Authors (8)

Xiaofang Xu, Chunde Yang, Qiang He, Kunxian Shu, Yuan Xinpu, Zhiguang Chen, Yunping Zhu, Tao Chen

Seen in the charts

• The architectures
• Code activity
• Models and the authors behind them

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