Prior-vs-physics benchmark for DL de novo sequencing
benchmark
Prior-vs-physics benchmark for DL de novo sequencing: benchmark. Benchmark that disentangles how much of a DL de novo sequencer’s output reflects MS/MS fragmentation evidence vs learned peptide-sequence priors: important for assessing…
Benchmark that disentangles how much of a DL de novo sequencer’s output reflects MS/MS fragmentation evidence vs learned peptide-sequence priors: important for assessing robustness on out-of-distribution proteomes.
| Kind | benchmark |
| Acquisition | DDA |
Data
What the papers describing this method trained it on and reported its results on, as each paper states it. A version is named only where the paper names one.
Also used, purpose not recorded
- Casanovo digestion enzyme bias data (as deposited)
- Nine-species benchmark (revised (main))