sORF noncanonical MHC-I peptides
downstream-application
sORF noncanonical MHC-I peptides: downstream-application. Combines Ribo-seq-derived sORF databases with database search and de novo sequencing to identify 308 noncanonical MHC class I peptides from two tumor cell lines.
Combines Ribo-seq-derived sORF databases with database search and de novo sequencing to identify 308 noncanonical MHC class I peptides from two tumor cell lines.
| Kind | downstream-application |
| Deep learning | no |
| Acquisition | DDA |
| Application area | Immunopeptidomics / neoantigen |
Paper describing it
- An Integrated Approach for Discovering Noncanonical MHC-I Peptides Encoded by Small Open Reading Frames (2021, Journal of the American Society for Mass Spectrometry, peer-reviewed)