Stitch

post-processor · Sequence assembly

Stitch: post-processor · Sequence assembly. Assembles de novo peptides from Casanovo, PEAKS, pNovo and MaxNovo into full antibody sequences, and corrects the two error classes that assembly alone cannot: mass…

Assembles de novo peptides from Casanovo, PEAKS, pNovo and MaxNovo into full antibody sequences, and corrects the two error classes that assembly alone cannot: mass coincidences, where a different residue combination matches the same mass, and I/L ambiguity.

Kind post-processor
Deep learning no
Acquisition DDA
Family Sequence assembly

Code

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Data

What the papers describing this method trained it on and reported its results on, as each paper states it. A version is named only where the paper names one.

Evaluated on

Also used, purpose not recorded

Papers describing it (4)

Papers using it (2)

Applications and evaluations that ran this method. They are not counted among its authors below.

Authors (3)

Douwe Schulte, Weiwei Peng, Joost Snijder

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