Anti-FLAG-M2 antibody sequencing
deposit · DDA · 1 version · 6 papers
MS-based sequencing of the anti-FLAG-M2 antibody, deposited as a study result and reused as an antibody test case.
| Kind | deposit |
| Acquisition | DDA |
| Organisms | Mus musculus |
MS-based sequencing of the anti-FLAG-M2 antibody, deposited as a study result and reused as an antibody test case.
Versions
as deposited
Where it lives:
- PRIDE · PXD023419
Used by (6)
- Reference-free protein sequencing by consensus assembly of redundant de novo peptide reads (2026) preprint as deposited
- A Handle on Mass Coincidence Errors in De Novo Sequencing of Antibodies by Bottom-up Proteomics (2024) peer-reviewed as deposited
- PowerNovo: de novo peptide sequencing via tandem mass spectrometry using an ensemble of transformer and BERT models (2024) peer-reviewed as deposited
- Introducing π-HelixNovo for practical large-scale de novo peptide sequencing (2024) peer-reviewed as deposited
- Comprehensive evaluation of peptide de novo sequencing tools for monoclonal antibody assembly (2023) peer-reviewed as deposited
- Current state, existing challenges, and promising progress for de novo sequencing and assembly of monoclonal antibodies (2022) preprint as deposited
Methods on these papers (5)
- De novo evaluation for monoclonal-antibody assembly benchmark
- PowerNovo algorithm
- Stitch post-processor
- borgonovo post-processor
- π-HelixNovo algorithm
Taken from the describing links only, so a paper that merely ran a tool on this data does not make that tool a method of it.