SWPepNovo
algorithm · Graph / DP
SWPepNovo: algorithm · Graph / DP. Parallelises a PepNovo-style scoring search across the Sunway many-core architecture, using a two-level task partition and a load-balancing scheme to keep the compute…
Parallelises a PepNovo-style scoring search across the Sunway many-core architecture, using a two-level task partition and a load-balancing scheme to keep the compute elements busy. Targets the case where the spectrum dataset, not the algorithm, is the bottleneck. From the same Hunan group as MRUniNovo.
| Kind | algorithm |
| Deep learning | no |
| Acquisition | DDA |
| Family | Graph / DP |
Paper describing it
- SWPepNovo: An Efficient De Novo Peptide Sequencing Tool for Large-scale MS/MS Spectra Analysis (2019, International Journal of Biological Sciences, peer-reviewed)