DeNovo Peptide Identification Deep Learning Test Set
deposit · 1 version · 5 papers
DeNovo Peptide Identification Deep Learning Test Set
| Kind | deposit |
| Organisms | Halanaerobium congolense, Caulobacter crescentus (strain na1000 / cb15n), Akkermansia muciniphila atcc baa-835, Enterococcus faecalis (streptococcus faecalis) |
DeNovo Peptide Identification Deep Learning Test Set
Versions
as deposited
released 2018-07-30
Where it lives:
- PRIDE · PXD010613
Deposited by (2)
More than one paper here means one piece of work published twice, a preprint and its version of record; a deposit itself happens once.
- Uncovering Hidden Members and Functions of the Soil Microbiome Using De Novo Metaproteomics (2022) peer-reviewed as deposited
- Proteomics of natural bacterial isolates powered by deep learning-based de novo identification (2018) preprint as deposited
Evaluated on by (2)
- dIon: Fragmentation-Based Invariance for Self-Supervised Learning of Tandem Mass Spectra (2026) preprint as deposited
- Pairwise Attention: Leveraging Mass Differences to Enhance De Novo Sequencing of Mass Spectra (2025) preprint as deposited
Used by (1)
Papers that ran on it where the catalog has not recorded whether for training or for evaluation.
- Uncovering hidden members and functions of the soil microbiome using de novo metaproteomics (2020) preprint as deposited
Methods on these papers (3)
Taken from the describing links only, so a paper that merely ran a tool on this data does not make that tool a method of it.