HeLa Q Exactive HF runs (pNovo 3)
deposit · DDA · 2 versions · 1 paper
Two HeLa cell runs on a Q Exactive HF, used by pNovo 3 as its high-resolution human evaluation data and named QE_HF_X1 and QE_HF_X2 in its tables. One PRIDE submission, two subsets.
| Kind | deposit |
| Acquisition | DDA |
| Organisms | Homo sapiens |
| Home | https://www.ebi.ac.uk/pride/archive/projects/PXD006932 |
Two HeLa cell runs on a Q Exactive HF, used by pNovo 3 as its high-resolution human evaluation data and named QE_HF_X1 and QE_HF_X2 in its tables. One PRIDE submission, two subsets.
Versions
QE_HF_X1
3 raw files, 219,698 MS/MS spectra, 196,759 PSMs.
spectra 219,698
Where it lives:
- PRIDE · PXD006932 QE_HF_X1
QE_HF_X2
3 raw files, 314,608 MS/MS spectra, 201,301 PSMs.
spectra 314,608
Where it lives:
- PRIDE · PXD006932 QE_HF_X2
Used by (1)
- pNovo 3: precise de novo peptide sequencing using a learning-to-rank framework (2019) peer-reviewed QE_HF_X1, QE_HF_X2
Methods on these papers (1)
- pNovo 3 algorithm
Taken from the describing links only, so a paper that merely ran a tool on this data does not make that tool a method of it.