Indiana University-Purdue University Indianapolis
Indianapolis · 2 authors
Indiana University-Purdue University Indianapolis (Indianapolis): 2 authors and 11 papers in the de novo peptide sequencing catalog.
Departments
- Department of BioHealth Informatics
Papers (11)
- AI proteomics: from protein identification to virtual cells (2026, Nature Methods)
- Generative AI Models for the Protein Scaffold Filling Problem (2025, Journal of Computational Biology)
- Deep Learning Approaches for the Protein Scaffold Filling Problem (2022, 2022 IEEE 34th International Conference on Tools with Artificial Intelligence (ICTAI))
- De Novo Sequencing of Peptides from High‐Resolution Bottom‐Up Tandem Mass Spectra using Top‐Down Intended Methods (2017, PROTEOMICS)
- Filling a Protein Scaffold With a Reference (2017, IEEE Transactions on NanoBioscience)
- Top-down analysis of protein samples by de novo sequencing techniques (2016, Bioinformatics)
- Filling a Protein Scaffold with a Reference (2016, Lecture Notes in Computer Science)
- De Novo Sequencing of Peptides from Top-Down Tandem Mass Spectra (2015, Journal of Proteome Research)
- De Novo Protein Sequencing by Combining Top-Down and Bottom-Up Tandem Mass Spectra (2014, Journal of Proteome Research)
- Better score function for peptide identification with ETD MS/MS spectra (2010, BMC Bioinformatics)
- Automated protein (re)sequencing with MS/MS and a homologous database yields almost full coverage and accuracy (2009, Bioinformatics)