Institute for Systems Biology
Seattle, USA · 14 authors
Institute for Systems Biology (Seattle, USA): 14 authors and 15 papers in the de novo peptide sequencing catalog.
Departments
- Fred Hutchinson Cancer Research Center
Papers (15)
- AI proteomics: from protein identification to virtual cells (2026, Nature Methods)
- The Immunopeptidome from a Genomic Perspective: Establishing the Noncanonical Landscape of MHC Class I–Associated Peptides (2023, Cancer Immunology Research)
- Assessing Protein Sequence Database Suitability Using De Novo Sequencing (2020, Molecular & Cellular Proteomics)
- De Novo Sequencing and Homology Searching (2012, Molecular & Cellular Proteomics)
- Identification of Disulfide Bonds in Protein Proteolytic Degradation Products Using de novo-Protein Unique Sequence Tags Approach (2010, Journal of Proteome Research)
- De Novo Sequencing of Unique Sequence Tags for Discovery of Post-Translational Modifications of Proteins (2008, Analytical Chemistry)
- DirecTag: Accurate Sequence Tags from Peptide MS/MS through Statistical Scoring (2008, Journal of Proteome Research)
- Identification of Protein Modifications Using MS/MS de Novo Sequencing and the OpenSea Alignment Algorithm (2005, Journal of Proteome Research)
- Informatics for protein identification by mass spectrometry (2005, Methods)
- High-Throughput Identification of Proteins and Unanticipated Sequence Modifications Using a Mass-Based Alignment Algorithm for MS/MS de Novo Sequencing Results (2004, Analytical Chemistry)
- Searching Sequence Databases via De Novo Peptide Sequencing by Tandem Mass Spectrometry (2002, Molecular Biotechnology)
- Differential stable isotope labeling of peptides for quantitation and de novo sequence derivation (2001, Rapid Communications in Mass Spectrometry)
- Implementation and Uses of Automated de Novo Peptide Sequencing by Tandem Mass Spectrometry (2001, Analytical Chemistry)
- Sequence database searches via de novo peptide sequencing by tandem mass spectrometry (1997, Rapid Communications in Mass Spectrometry)
- Computer program (SEQPEP) to aid in the interpretation of high-energy collision tandem mass spectra of peptides (1989, Biological Mass Spectrometry)