Robert Koch Institute
Berlin, Germany · 5 authors
Robert Koch Institute (Berlin, Germany): 5 authors and 11 papers in the de novo peptide sequencing catalog.
Departments
- Centre for Artificial Intelligence in Public Health Research
- Data Competence Center MF 2
- MF1
- Research Group Bioinformatics
Papers (11)
- MegaPX: fast and space-efficient peptide assignment method using IBF-based multi-indexing (2026, Bioinformatics)
- From Identification to Insight: Making Full Use of the Diagnostic Potential of MS/MS Proteotyping in Clinical Microbiology Using Efficient Bioinformatics (2025, Journal of Proteome Research)
- Limitations of de novo sequencing in resolving sequence ambiguity (2025, bioRxiv)
- MegaPX: fast and space-efficient peptide assignment method using IBF-based multi-indexing (2025, bioRxiv)
- Metaproteomics Beyond Databases: Addressing the Challenges and Potentials of De Novo Sequencing (2025, Proteomics)
- Comprehensive evaluation of peptide de novo sequencing tools for monoclonal antibody assembly (2023, Briefings in Bioinformatics)
- Current state, existing challenges, and promising progress for de novo sequencing and assembly of monoclonal antibodies (2022, bioRxiv)
- A potential golden age to come—current tools, recent use cases, and future avenues for de novo sequencing in proteomics (2018, Proteomics)
- Evaluating de novo sequencing in proteomics: already an accurate alternative to database-driven peptide identification? (2017, Briefings in Bioinformatics)
- Tandem Mass Spectrum Sequencing: An Alternative to Database Search Engines in Shotgun Proteomics (2016, Advances in Experimental Medicine and Biology)
- DeNovoGUI: An Open Source Graphical User Interface for de Novo Sequencing of Tandem Mass Spectra (2014, Journal of Proteome Research)