University of Wisconsin-Madison
Madison, USA, Madison · 28 authors
University of Wisconsin-Madison (Madison, USA, Madison): 28 authors and 13 papers in the de novo peptide sequencing catalog.
Departments
- Department of Chemistry
- Genome Center of Wisconsin
- School of Pharmacy and Department of Chemistry
Papers (13)
- A living proteomics benchmark for comprehensive evaluation of deep learning-based de novo peptide sequencing tools (2026, Nature Methods (Registered Report))
- HyPep: An Open-Source Software for Identification and Discovery of Neuropeptides Using Sequence Homology Search (2023, Journal of Proteome Research)
- Enrichment and fragmentation approaches for enhanced detection and characterization of endogenous glycosylated neuropeptides (2023, PROTEOMICS)
- Mass spectrometry profiling and quantitation of changes in circulating hormones secreted over time in Cancer borealis hemolymph due to feeding behavior (2022, Analytical and Bioanalytical Chemistry)
- Exploring the Sexual Dimorphism of Crustacean Neuropeptide Expression Using Callinectes sapidus as a Model Organism (2021, Journal of Proteome Research)
- Mass Spectrometry Quantification, Localization, and Discovery of Feeding-Related Neuropeptides in Cancer borealis (2021, ACS Chemical Neuroscience)
- PRESnovo: Prescreening Prior to de novo Sequencing to Improve Accuracy and Sensitivity of Neuropeptide Identification (2020, Journal of the American Society for Mass Spectrometry)
- Purification and characterisation of a protease (tamarillin) from tamarillo fruit (2018, Food Chemistry)
- Evolutionary instability of CUG-Leu in the genetic code of budding yeasts (2018, Nature Communications)
- Neutron-encoded Signatures Enable Product Ion Annotation From Tandem Mass Spectra (2013, Molecular & Cellular Proteomics)
- High-definition De Novo Sequencing of Crustacean Hyperglycemic Hormone (CHH)-family Neuropeptides (2012, Molecular & Cellular Proteomics)
- Combining Bottom-Up and Top-Down Mass Spectrometric Strategies for De Novo Sequencing of the Crustacean Hyperglycemic Hormone from Cancer borealis (2009, Analytical Chemistry)
- De Novo Sequencing of Neuropeptides Using Reductive Isotopic Methylation and Investigation of ESI QTOF MS/MS Fragmentation Pattern of Neuropeptides with N-Terminal Dimethylation (2005, Analytical Chemistry)