De novo peptide identification via mixed-integer linear optimization and tandem mass spectrometry

peer-reviewed · Computer Aided Chemical Engineering · 2008

peer-reviewed · Computer Aided Chemical Engineering · 2008. Peter A. DiMaggio et al.

Date	2008-02-22
Type	peer-reviewed
Venue	Computer Aided Chemical Engineering
Publisher	Elsevier
Contribution	algorithm
DOI	10.1016/s1570-7946(07)80189-1
Citations (OpenAlex)	1

Authors

1. Peter A. DiMaggio · Imperial College London, Princeton University
2. Christodoulos A. Floudas · Princeton University, The Scripps Research Institute

Methods and tools

• MILP de novo peptide identification framework: Mixed-integer optimization framework for de novo peptide identification from tandem mass spectra.

Cites (6)

• De Novo Analysis of Peptide Tandem Mass Spectra by Spectral Graph Partitioning (2006) crossref
• PepNovo: de novo peptide sequencing via probabilistic network modeling (2005) crossref
• PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry (2003) crossref
• A Dynamic Programming Approach to De Novo Peptide Sequencing via Tandem Mass Spectrometry (2001) crossref
• De novo peptide sequencing via tandem mass spectrometry (1999) crossref
• Sequence database searches via de novo peptide sequencing by tandem mass spectrometry (1997) crossref

Cited by (1)

• Acetylating Tryptic Peptides Enhances b Ion Intensity in MALDI TOF/TOF: Implications in Peptide Sequencing and Identification of Proteins in an Antarctic Bacterium Pseudomonas Syringae (2010) semanticscholar

Seen in the charts

• Browse all papers
• How the field cites itself
• Academic impact by citation count

Back to the full map