Metaheuristics based de novo protein sequencing: A new approach
peer-reviewed · Applied Soft Computing · 2011
peer-reviewed · Applied Soft Computing · 2011. Jean-Charles Boisson et al.
| Date | 2011-03-01 |
| Type | peer-reviewed |
| Venue | Applied Soft Computing |
| Publisher | Elsevier BV |
| Contribution | algorithm |
| DOI | 10.1016/j.asoc.2010.08.007 |
| Citations (OpenAlex) | 2 |
Methods and tools
- Adaptive GA for tandem-MS peptide sequencing: Adaptive genetic algorithm for protein sequencing from tandem MS. Represents peptides as GA individuals, evolves them against the observed spectrum; the adaptive component tunes mutation / crossover rates on the fly.
Cites (6)
- PepNovo: de novo peptide sequencing via probabilistic network modeling (2005) crossref
- Sequence optimization as an alternative to de novo analysis of tandem mass spectrometry data (2004) crossref
- High-Throughput Identification of Proteins and Unanticipated Sequence Modifications Using a Mass-Based Alignment Algorithm for MS/MS de Novo Sequencing Results (2004) crossref
- Algorithms for de novo peptide sequencing using tandem mass spectrometry (2004) crossref
- A Dynamic Programming Approach to De Novo Peptide Sequencing via Tandem Mass Spectrometry (2001) crossref
- De novo peptide sequencing via tandem mass spectrometry (1999) crossref