Encoded-sentence protein decoding
downstream-application
Encoded-sentence protein decoding: downstream-application. Decodes an E. coli-expressed protein whose sequence spells two English sentences, by bottom-up proteomics, de novo sequencing and a dictionary search.
Decodes an E. coli-expressed protein whose sequence spells two English sentences, by bottom-up proteomics, de novo sequencing and a dictionary search.
| Kind | downstream-application |
| Deep learning | no |
| Acquisition | DDA |
| Application area | General proteomics |
Data
What the papers describing this method trained it on and reported its results on, as each paper states it. A version is named only where the paper names one.
Deposited
Paper describing it
- Quick and clean: Cracking sentences encoded in E. coli by LC–MS/MS, de novo sequencing, and dictionary search (2019, EuPA Open Proteomics, peer-reviewed)