Matthias Mann

8 papers in the catalog · Hinxton, UK, Germany, Heidelberg, Denmark, USA, La Jolla

Matthias Mann: 8 papers in the catalog · Hinxton, UK, Germany, Heidelberg, Denmark, USA, La Jolla · European Molecular Biology Laboratory, Max Planck Institute of Biochemistry · Works on AI proteomics perspective, Encoded-sentence protein decoding…

Affiliations

European Molecular Biology Laboratory · Protein & Peptide Group
Max Planck Institute of Biochemistry · Computational Systems Biochemistry Research Group
Max Planck Institute of Biochemistry · Department of Proteomics and Signal Transduction
Max Planck Institute of Molecular Cell Biology and Genetics
Novo Nordisk Foundation
University of California San Diego
University of Copenhagen · Department of Biology
University of Southern Denmark · Department of Biochemistry and Molecular Biology

Elsewhere

ORCID 0000-0003-1292-4799 · OpenAlex

Papers

AI proteomics: from protein identification to virtual cells (2026, Nature Methods)
Quick and clean: Cracking sentences encoded in E. coli by LC–MS/MS, de novo sequencing, and dictionary search (2019, EuPA Open Proteomics)
How much peptide sequence information is contained in ion trap tandem mass spectra? (2008, Journal of the American Society for Mass Spectrometry)
Multi-spectra peptide sequencing and its applications to multistage mass spectrometry (2008, Bioinformatics)
“De Novo” Sequencing of Peptides Recovered from In-Gel Digested Proteins by Nanoelectrospray Tandem Mass Spectrometry (2003, Molecular Biotechnology)
De Novo Peptide Sequencing by Nanoelectrospray Tandem Mass Spectrometry Using Triple Quadrupole and Quadrupole/Time-of-Flight Instruments (2003, Mass Spectrometry of Proteins and Peptides)
Rapid de novo peptide sequencing by a combination of nanoelectrospray, isotopic labeling and a quadrupole/time-of-flight mass spectrometer (1997, Rapid Communications in Mass Spectrometry)
Error-Tolerant Identification of Peptides in Sequence Databases by Peptide Sequence Tags (1994, Analytical Chemistry)

Methods and tools

AI proteomics perspective, Encoded-sentence protein decoding, Ion trap spectrum sequence information analysis, Multistage MS multi-spectra sequencing, Peptide sequence tags, Rapid QTOF de novo sequencing

Co-authors (72)

Ranked by Newman fractional collaboration strength, so a pair on a two-author paper counts for more than a pair on a 50-author consortium paper.

Matthias Wilm strength 1.75, 4 shared
Lili Niu strength 1.00, 1 shared
Andrej Shevchenko strength 0.75, 3 shared
Igor V. Chernushevich strength 0.75, 3 shared
Jürgen Cox strength 0.52, 2 shared
Nina C. Hubner strength 0.50, 1 shared
Nuno Bandeira strength 0.35, 2 shared
Jesper V. Olsen strength 0.33, 1 shared
Pavel A. Pevzner strength 0.33, 1 shared
Anna Shevchenko strength 0.25, 1 shared
Bruce A. Thomson strength 0.17, 1 shared
Kenneth G. Standing strength 0.17, 1 shared
Werner Ens strength 0.17, 1 shared
Asif Khan strength 0.02, 1 shared
Benjamin Boyang Sun strength 0.02, 1 shared
Bing Zhang strength 0.02, 1 shared
Chao Liu strength 0.02, 1 shared
Chen Li strength 0.02, 1 shared
Cheng Chang strength 0.02, 1 shared
Chris Sander strength 0.02, 1 shared
Christopher M. Overall strength 0.02, 1 shared
Eric W. Deutsch strength 0.02, 1 shared
Fuchu He strength 0.02, 1 shared
Gilbert S. Omenn strength 0.02, 1 shared
Haixu Tang strength 0.02, 1 shared
Henning Hermjakob strength 0.02, 1 shared
Huanhuan Gao strength 0.02, 1 shared
Huilin Jin strength 0.02, 1 shared
Jiangning Song strength 0.02, 1 shared
Jianhua Yao strength 0.02, 1 shared
Jiaxing Huang strength 0.02, 1 shared
Jonathan R. Krieger strength 0.02, 1 shared
Juan Antonio Vizcaíno strength 0.02, 1 shared
Jun A strength 0.02, 1 shared
Kaicheng Yu strength 0.02, 1 shared
Kang Zhang strength 0.02, 1 shared
Le Zhang strength 0.02, 1 shared
Liang Qiao strength 0.02, 1 shared
Linfeng Zhang strength 0.02, 1 shared
Liujia Qian strength 0.02, 1 shared

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