Genetic-algorithm sequence optimization (PNNL)

algorithm · Genetic algorithm

Genetic-algorithm sequence optimization (PNNL): algorithm · Genetic algorithm. Reconstructs peptide sequences from tandem spectra with a genetic algorithm, later extended to parallel multi-objective optimisation with Pareto ranking of conflicting…

Reconstructs peptide sequences from tandem spectra with a genetic algorithm, later extended to parallel multi-objective optimisation with Pareto ranking of conflicting scores.

Kind	algorithm
Deep learning	no
Acquisition	DDA
Family	Genetic algorithm

Papers describing it (2)

• Constrained De Novo peptide identification via multi-objective optimization (2004, 18th International Parallel and Distributed Processing Symposium, 2004. Proceedings, peer-reviewed)
• Sequence optimization as an alternative to de novo analysis of tandem mass spectrometry data (2004, Bioinformatics, peer-reviewed)

Authors (6)

J.M. Malard, A. Heredia-Langner, D.J. Baxter, Kristin H. Jarman, W.R. Cannon, K.D. Jarman

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