Kristin H. Jarman

6 papers in the catalog · USA

Kristin H. Jarman: 6 papers in the catalog · USA · Karius Inc., Pacific Northwest National Laboratory · Works on Genetic-algorithm sequence optimization (PNNL), Hierarchical subsequence de novo scoring (PNNL), MARLOWE

Affiliations

• Karius Inc.
• Pacific Northwest National Laboratory
• Pacific Northwest National Laboratory · Chemical & Biological Signatures Group

Elsewhere

ORCID 0000-0003-4783-1277 · OpenAlex

Papers

• MARLOWE: Taxonomic Characterization of Unknown Samples for Forensics Using De Novo Peptide Identification (2025, bioRxiv)
• MARLOWE: An Untargeted Proteomics, Statistical Approach to Taxonomic Classification for Forensics (2025, Journal of Proteome Research)
• Metaproteomic Characterization of Forensic Samples (2022, SSRN Electronic Journal)
• Sequence optimization as an alternative to de novo analysis of tandem mass spectrometry data (2004, Bioinformatics)
• Constrained De Novo peptide identification via multi-objective optimization (2004, 18th International Parallel and Distributed Processing Symposium, 2004. Proceedings)
• A model of random sequences for de novo peptide sequencing (2003, Third IEEE Symposium on Bioinformatics and Bioengineering, 2003. Proceedings)

Methods and tools

Genetic-algorithm sequence optimization (PNNL), Hierarchical subsequence de novo scoring (PNNL), MARLOWE, PNNL forensic metaproteomic characterization

Co-authors (15)

Ranked by Newman fractional collaboration strength, so a pair on a two-author paper counts for more than a pair on a 50-author consortium paper.

• A. Heredia-Langner strength 0.92, 3 shared
• W.R. Cannon strength 0.92, 3 shared
• K.D. Jarman strength 0.67, 2 shared
• Eric D. Merkley strength 0.56, 3 shared
• Sarah C. Jenson strength 0.56, 3 shared
• Dustin L. Crockett strength 0.36, 2 shared
• Natalie C. Heller-Lamar strength 0.36, 2 shared
• Anthony S. Barente strength 0.31, 2 shared
• Fanny Chu strength 0.31, 2 shared
• D.J. Baxter strength 0.25, 1 shared
• J.M. Malard strength 0.25, 1 shared
• Natalie C. Heller strength 0.20, 1 shared
• Aleksey Y. Ogurtsov strength 0.11, 1 shared
• Gelio Alves strength 0.11, 1 shared
• Yi-Kuo Yu strength 0.11, 1 shared

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