Hemp seed antimicrobial peptides
downstream-application
Hemp seed antimicrobial peptides: downstream-application. Screens HAN-J6 hemp seed (Cannabis sativa L.) protein for antimicrobial peptides, a source not previously characterised this way. Defatting, alkaline extraction and acid…
Screens HAN-J6 hemp seed (Cannabis sativa L.) protein for antimicrobial peptides, a source not previously characterised this way. Defatting, alkaline extraction and acid precipitation, then trypsin/Lys-C digestion and LC-MS; PEAKS 12 de novo sequencing returned 3,985 peptides, and CAMP R3 and AMP Scanner_V2 screened the ALC>=80% list to 56 and 260 candidates respectively, 27 of which both tools agreed on.
| Kind | downstream-application |
| Deep learning | no |
| Acquisition | DDA |
| Application area | Bioactive peptides |
Paper describing it
- Identification of Antimicrobial Peptides from HAN-J6 Hemp Seeds Using Mass Spectrometry and De Novo Peptide Sequencing (2026, Journal of Student-Scientists’ Research, abstract)