NovoHCD
algorithm · Graph / DP
NovoHCD: algorithm · Graph / DP. De novo sequencing of HCD spectra with a multi-edge spectrum graph that integrates amino acid combinations, peptide tags and immonium ions.
De novo sequencing of HCD spectra with a multi-edge spectrum graph that integrates amino acid combinations, peptide tags and immonium ions.
| Kind | algorithm |
| Deep learning | no |
| Acquisition | DDA |
| Family | Graph / DP |
Papers describing it (3)
- A multi-edge graph based de novo peptide sequencing method for HCD spectra (2013, 2013 IEEE International Conference on Bioinformatics and Biomedicine, peer-reviewed)
- NovoHCD: De novo Peptide Sequencing From HCD Spectra (2014, IEEE Transactions on NanoBioscience, peer-reviewed)
- De novo peptide sequencing methods for tandem mass spectra (2015, thesis)