Winnow

post-processor

Winnow: post-processor. NN rescoring + decoy-free FDR

NN rescoring + decoy-free FDR

Kind	post-processor
Deep learning	yes
Acquisition	both

Papers

• Generalizable Direct Protein Sequencing With InstaNexus (2026, Molecular & Cellular Proteomics, peer-reviewed)
• De novo peptide sequencing rescoring and FDR estimation with Winnow (2025, arXiv, preprint)

Authors (20)

Amandla Mabona, Jemma Daniel, Henrik Servais Janssen Knudsen, Rachel Catzel, Kevin Eloff, Erwin M. Schoof, Nicolas Lopez Carranza, Timothy P. Jenkins, Jeroen Van Goey, Konstantinos Kalogeropoulos, Marco Reverenna, Maike Wennekers Nielsen, Darian Stephan Wolff, Elpida Lytra, Suthimon Thumtecho, Pasquale D. Colaianni, Anne Ljungars, Andreas Hougaard Laustsen, Marie V. Lukassen, Alberto Santos

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