Eric D. Merkley

7 papers in the catalog · USA

Eric D. Merkley: 7 papers in the catalog · USA · Pacific Northwest National Laboratory, Pacific Northwest National Laboratory · Works on Flying under the radar review, Kaiko, MARLOWE

Affiliations

• Pacific Northwest National Laboratory
• Pacific Northwest National Laboratory · Chemical & Biological Signatures Group

Elsewhere

ORCID 0000-0002-5486-4723 · OpenAlex

Papers

• MARLOWE: Taxonomic Characterization of Unknown Samples for Forensics Using De Novo Peptide Identification (2025, bioRxiv)
• MARLOWE: An Untargeted Proteomics, Statistical Approach to Taxonomic Classification for Forensics (2025, Journal of Proteome Research)
• Uncovering Hidden Members and Functions of the Soil Microbiome Using De Novo Metaproteomics (2022, Journal of Proteome Research)
• Metaproteomic Characterization of Forensic Samples (2022, SSRN Electronic Journal)
• Uncovering hidden members and functions of the soil microbiome using de novo metaproteomics (2020, bioRxiv)
• Flying blind, or just flying under the radar? The underappreciated power of de novo methods of mass spectrometric peptide identification (2020, Protein Science)
• Proteomics of natural bacterial isolates powered by deep learning-based de novo identification (2018, bioRxiv)

Methods and tools

Flying under the radar review, Kaiko, MARLOWE, PNNL forensic metaproteomic characterization

Co-authors (21)

Ranked by Newman fractional collaboration strength, so a pair on a two-author paper counts for more than a pair on a 50-author consortium paper.

• Sarah C. Jenson strength 1.40, 7 shared
• Kristin H. Jarman strength 0.56, 3 shared
• Isabelle O’Bryon strength 0.50, 1 shared
• Dustin L. Crockett strength 0.36, 2 shared
• Natalie C. Heller-Lamar strength 0.36, 2 shared
• Ernesto S. Nakayasu strength 0.34, 3 shared
• Hugh D. Mitchell strength 0.34, 3 shared
• Joon-Yong Lee strength 0.34, 3 shared
• Meagan C. Burnet strength 0.34, 3 shared
• Samuel H. Payne strength 0.34, 3 shared
• Anthony S. Barente strength 0.31, 2 shared
• Fanny Chu strength 0.31, 2 shared
• Carrie D. Nicora strength 0.20, 2 shared
• Janet K. Jansson strength 0.20, 2 shared
• Kristin E. Burnum-Johnson strength 0.20, 2 shared
• Natalie C. Heller strength 0.20, 1 shared
• Ruonan Wu strength 0.20, 2 shared
• Anil K. Shukla strength 0.14, 1 shared
• Aleksey Y. Ogurtsov strength 0.11, 1 shared
• Gelio Alves strength 0.11, 1 shared
• Yi-Kuo Yu strength 0.11, 1 shared

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