A Dynamic Programming Algorithm for De Novo Peptide Sequencing with Variable Scoring
peer-reviewed · Lecture Notes in Computer Science · 2008
peer-reviewed · Lecture Notes in Computer Science · 2008. Matthew A. Goto et al.
| Date | 2008-04-29 |
| Type | peer-reviewed |
| Venue | Lecture Notes in Computer Science |
| Publisher | Springer Berlin Heidelberg |
| Contribution | algorithm |
| DOI | 10.1007/978-3-540-79450-9_16 |
| Citations (OpenAlex) | 3 |
| Venue 2-year citedness | 1.54 |
Methods and tools
- Variable-scoring DP de novo sequencing: Dynamic programming over the spectrum graph where vertex scores depend on incident edges, solving forbidden-pairs paths in polynomial time.
Cites (6)
- MSNovo: A Dynamic Programming Algorithm for de Novo Peptide Sequencing via Tandem Mass Spectrometry (2007) crossref
- NovoHMM: A Hidden Markov Model for de Novo Peptide Sequencing (2005) crossref
- PepNovo: de novo peptide sequencing via probabilistic network modeling (2005) crossref
- Algorithms for de novo peptide sequencing using tandem mass spectrometry (2004) crossref
- A Dynamic Programming Approach to De Novo Peptide Sequencing via Tandem Mass Spectrometry (2001) crossref
- De novo peptide sequencing via tandem mass spectrometry (1999) crossref