An effective algorithm for peptide de novo sequencing from MS/MS spectra
peer-reviewed · Journal of Computer and System Sciences · 2005
peer-reviewed · Journal of Computer and System Sciences · 2005. Bin Ma et al.
| Date | 2005-05-01 |
| Type | peer-reviewed |
| Venue | Journal of Computer and System Sciences |
| Publisher | Elsevier BV |
| Contribution | algorithm |
| DOI | 10.1016/j.jcss.2004.12.001 |
| Citations (OpenAlex) | 43 |
| Venue 2-year citedness | 0.92 |
Methods and tools
- PEAKS: Commercial DP-based de novo
Cites (6)
- PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry (2003) crossref
- A Dynamic Programming Approach to De Novo Peptide Sequencing via Tandem Mass Spectrometry (2001) both
- De novo peptide sequencing via tandem mass spectrometry (1999) both
- Sequence database searches via de novo peptide sequencing by tandem mass spectrometry (1997) both
- Error-Tolerant Identification of Peptides in Sequence Databases by Peptide Sequence Tags (1994) both
- Computer program (SEQPEP) to aid in the interpretation of high-energy collision tandem mass spectra of peptides (1989) both
Cited by (9)
- An algorithm for peptide de novo sequencing from a group of SILAC labeled MS/MS spectra (2025) crossref
- Algorithms for de-novo sequencing of peptides by tandem mass spectrometry: A review (2023) crossref
- Computationally instrument-resolution-independent de novo peptide sequencing for high-resolution devices (2021) crossref
- De novo sequencing of proteins by mass spectrometry (2020) both
- Flying blind, or just flying under the radar? The underappreciated power of de novo methods of mass spectrometric peptide identification (2020) crossref
- Novor: Real-Time Peptide de Novo Sequencing Software (2015) both
- De Novo Sequencing and Homology Searching (2012) both
- Identification of a novel Plasmopara halstedii elicitor protein combining de novo peptide sequencing algorithms and RACE-PCR (2010) semanticscholar
- Spectral Dictionaries: Integrating de novo Peptide Sequencing with Database Search of Tandem Mass Spectra (2009) both