PRIME: A Mass Spectrum Data Mining Tool for De Nova Sequencing and PTMs Identification
peer-reviewed · Journal of Computer Science and Technology · 2005
peer-reviewed · Journal of Computer Science and Technology · 2005. Bo Yan et al.
| Date | 2005-07-01 |
| Type | peer-reviewed |
| Venue | Journal of Computer Science and Technology |
| Publisher | Springer Science and Business Media LLC |
| Contribution | algorithm |
| DOI | 10.1007/s11390-005-0483-5 |
| Citations (OpenAlex) | 5 |
Methods and tools
- PRIME: A data mining tool for de novo peptide sequencing and identification of post-translational modifications from MS/MS spectra.
Cites (9)
- A graph-theoretic approach for the separation of b and y ions in tandem mass spectra (2005) crossref
- PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry (2003) crossref
- A Suboptimal Algorithm for De Novo Peptide Sequencing via Tandem Mass Spectrometry (2003) crossref
- A Dynamic Programming Approach to De Novo Peptide Sequencing via Tandem Mass Spectrometry (2001) crossref
- Implementation and Uses of Automated de Novo Peptide Sequencing by Tandem Mass Spectrometry (2001) crossref
- De novo peptide sequencing via tandem mass spectrometry (1999) crossref
- Automated interpretation of high-energy collision-induced dissociation spectra of singly protonated peptides by ‘seqms’, a software aid forde novo sequencing by tandem mass spectrometry (1998) crossref
- Sequence database searches via de novo peptide sequencing by tandem mass spectrometry (1997) crossref
- Fast algorithm for peptide sequencing by mass spectroscopy (1990) crossref
Cited by (3)
- Tutorial on de novo peptide sequencing using MS/MS mass spectrometry (2012) crossref
- ProbPS: A new model for peak selection based on quantifying the dependence of the existence of derivative peaks on primary ion intensity (2011) both
- Algorithm Development of de novo Peptide Sequencing Via Tandem Mass Spectrometry (2010) crossref