AL-DeepNovo-DIA
algorithm · CNN + RNN
AL-DeepNovo-DIA: algorithm · CNN + RNN. Active-learning wrapper around Tran et al. 2019’s DeepNovo-DIA. Uses acquisition functions to pick the most informative spectra at each training iteration instead of…
Active-learning wrapper around Tran et al. 2019’s DeepNovo-DIA. Uses acquisition functions to pick the most informative spectra at each training iteration instead of random selection. First published as AL-DeepNovo-DIA (ICML 2022 Workshop on Computational Biology, Ebrahimi & Guo); rebranded ActiveNovo_DIA in Ebrahimi’s 2025 UNT PhD thesis.
| Kind | algorithm |
| Family | CNN + RNN |
| Deep learning | yes |
| Acquisition | DIA |
| Also known as | ActiveNovo-DIA, ActiveNovo_DIA |
Papers
- De Novo Peptide Sequencing for Data-independent Acquisition (DIA) Using Deep Learning (2025, thesis)
- Deep Active Learning for De Novo Peptide Sequencing from Data-independent-acquisition Mass Spectrometry (2022, ICML 2022 Workshop on Computational Biology, ML conference)