De novo evaluation for monoclonal-antibody assembly

benchmark

De novo evaluation for monoclonal-antibody assembly: benchmark. Benchmark evaluation of de novo peptide sequencing tools for monoclonal antibody assembly.

Benchmark evaluation of de novo peptide sequencing tools for monoclonal antibody assembly.

Kind	benchmark
Deep learning	no
Acquisition	DDA

Data

What the papers describing this method trained it on and reported its results on, as each paper states it. A version is named only where the paper names one.

Deposited

• Supplementary Data for “Comprehensive evaluation of peptide de novo sequencing tools for monoclonal antibody assembly” (as deposited) · 2023 peer-reviewed

Also used, purpose not recorded

• Anti-FLAG-M2 antibody sequencing (as deposited) · 2022 preprint, 2023 peer-reviewed
• Monoclonal antibody de novo assembly (as deposited) · 2023 peer-reviewed

Papers describing it (2)

• Current state, existing challenges, and promising progress for de novo sequencing and assembly of monoclonal antibodies (2022, bioRxiv, preprint)
• Comprehensive evaluation of peptide de novo sequencing tools for monoclonal antibody assembly (2023, Briefings in Bioinformatics, peer-reviewed)

Authors (5)

Denis Beslic, Georg Tscheuschner, Bernhard Y. Renard, Michael G. Weller, Thilo Muth

Seen in the charts

• Models and the authors behind them

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